122
runners
35
runs
Jogging in San Pablo Bay National Wildlife Refuge offers routes across flat, graded trails within an expansive 19,000-acre wetland habitat. The landscape features wide-open spaces, picturesque views of San Pablo Bay, and extensive tidal marshes, characterized by mudflats and pickleweed. This environment provides a serene setting for running, with opportunities to observe diverse wildlife, particularly migratory birds. The refuge's trails are well-suited for easy running and offer a sense of solitude.
Last updated: April 25, 2026
4
runners
5.80km
00:36
10m
10m
Moderate run. Good fitness required. Mostly paved surfaces. Suitable for all skill levels.
6
runners
18.5km
01:56
90m
90m
Hard run. Very good fitness required. Mostly paved surfaces. Suitable for all skill levels.

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12
runners
10.9km
01:14
70m
70m
Moderate run. Good fitness required. Mostly paved surfaces. Suitable for all skill levels.
17
runners
10.5km
01:05
20m
20m
Moderate run. Good fitness required. Mostly paved surfaces. Suitable for all skill levels.
7
runners
7.82km
00:49
40m
40m
Moderate run. Good fitness required. Mostly paved surfaces. Suitable for all skill levels.
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Popular around San Pablo Bay National Wildlife Refuge
Mare Island is a 3.5-mile long peninsula and offers great birding. Along with many varieties of waterfowl, there also is a population of the endangered Salt Marsh Harvest Mouse. Mare Island became a naval shipyard in 1852, but was closed in 1995.
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This is a wide, flat trail, perfect for an easy jog as you immerse yourself in the quiet of the vast marsh. From here, you can enjoy views of Vallejo and Mt. Tam in the distance.
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This trail runs along the edge of the Petaluma River wetlands and is a popular multi-use trail, so keep an eye out for others on the trail. The wetlands are an important area for wildlife, and are currently undergoing habitat restoration to improve conditions for native plants & animals.
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This trail runs along the edge of the Petaluma River wetlands and is a popular multi-use trail, so keep an eye out for others on the trail. The wetlands are an important area for wildlife, and are currently undergoing habitat restoration to improve conditions for native plants & animals.
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Mare Island is a 3.5-mile long peninsula and offers great birding. Along with many varieties of waterfowl there also is a population of the endangered Salt Marsh Harvest Mouse. Mare Island became a naval shipyard in 1852, but was closed in 1995.
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Mare Island San Pablo Bay Trail loops through a former Navy base, that was closed in 1996 and opened back up to the public in 2016.
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There are great views and bird watching along the bay front portion of the trail. The zone has only been converted from a closed military area to public access since 2016.
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Super fun bike path up to the "peak" of Mare Island - great views of the all the Bay. It is also on the oldest golf course west of the Mississippi - no longer in use though.
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The San Pablo Bay National Wildlife Refuge offers a diverse selection of over 20 running routes. These include 4 easy routes, 14 moderate routes, and 6 more challenging options, catering to various fitness levels.
You can expect predominantly flat and graded trails, making them ideal for easy running. The landscape is characterized by wide-open spaces, extensive tidal marshes, and mudflats, providing a smooth and consistent surface for your run.
The refuge is open daily from sunrise to sunset, offering ample opportunity for early morning or late afternoon jogs. Late fall through early January is particularly rewarding for wildlife viewing, as large populations of migrating and wintering waterbirds and shorebirds are present, adding a unique dimension to your run.
The provided information does not specify regulations regarding dogs on the trails within the San Pablo Bay National Wildlife Refuge. It is always best to check the official refuge website for the most current pet policies before your visit. You can find more information at fws.gov/refuge/san-pablo-bay.
Given the refuge's generally flat and graded trails, many routes are suitable for families. The easier routes, in particular, offer a pleasant experience for all ages. For example, the 4 easy routes available provide accessible options for a family outing.
Joggers can enjoy expansive views of San Pablo Bay and its extensive tidal marshes. The landscape features mudflats, vast stretches of pickleweed marsh, and open water. On clear days, you might even catch views of the surrounding mountains of Marin County, the East Bay, Sonoma, and the bridges of San Francisco.
Yes, there are several circular running routes. A popular option is the Mare Island San Pablo Bay Trail loop β San Pablo Bay National Wildlife Refuge, which is 3.6 miles (5.8 km) long. Another is the Vintage Car Wreck loop from Novato San Marin, a 6.5-mile (10.4 km) trail through wetland areas.
The running routes vary in difficulty. You'll find 4 easy routes, 14 moderate routes, and 6 difficult routes. This variety ensures there's something for every runner, from those seeking a gentle jog to those looking for a more challenging workout.
While the guide does not specify exact parking locations, the San Pablo Bay National Wildlife Refuge is designed for accessibility. It's advisable to check the official refuge website or specific trailheads for detailed parking information before your visit. You can find more information at fws.gov/refuge/san-pablo-bay.
The refuge is a critical wetland habitat, especially for migratory birds. You can expect significant wildlife viewing opportunities, particularly late fall through early January. The area supports a diverse ecosystem, including marine fish, birds, and mammals, such as the endangered salt marsh harvest mouse and the California Ridgway's rail.
Runners frequently praise the refuge for its distinct sense of solitude and the opportunity to connect with nature. The flat, graded trails and expansive bay and marsh views create a peaceful and invigorating outdoor experience, making it a favorite for those seeking a serene run.
Yes, for experienced runners looking for a longer challenge, the Running loop from Vallejo is a difficult 11.3-mile (18.2 km) path that traverses varied terrain, providing a more extensive running experience.


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